BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038D12SP1|AL430543
(947 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1496 1784 0.0
>3x_Contig1496
Length = 9544
Score = 1784 bits (897), Expect = 0.0
Identities = 935/947 (98%), Gaps = 3/947 (0%)
Strand = Plus / Minus
Query: 1 gatcagactctgatcaaccggttatgtccaargcctgckatactcttgaatgattttwat 60
||||||||||||||| ||||||||||||||| |||||| ||| |||||||||||||| ||
Sbjct: 4263 gatcagactctgatctaccggttatgtccaaggcctgcgata-tcttgaatgattttaat 4205
Query: 61 attcaatatgaagtgaccatcgtctctgctcatagaactccacacagaatgtctaagttc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4204 attcaatatgaagtgaccatcgtctctgctcatagaactccacacagaatgtctaagttt 4145
Query: 121 gctatcgaagctgctaaccgtggtatcaaagccatcattgccggtgctggtggtgcagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4144 gctatcgaagctgctaaccgtggtatcaaagccatcattgccggtgctggtggtgcagcc 4085
Query: 181 cacttaccaggcatggtggctgctatkactccgttgccagtcatcggtgttccatgtaaa 240
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 4084 cacttaccaggcatggtggctgctatgactccgttgccagtcatcggtgttcca-gtaaa 4026
Query: 241 gggctccaccctagacaggtgtcgattctctacattccattgtacaaatgccaagaggtg 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4025 gggctccaccctagac-ggtgtcgattctctacattccattgtacaaatgccaagaggtg 3967
Query: 301 tacccgtggccacagttgcwattaacaatagtacaaatgctgctttgttagcaatcagaa 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3966 tacccgtggccacagttgcaattaacaatagtacaaatgctgctttgttagcaatcagaa 3907
Query: 361 ttttgggtgcgtatgatccagtatacttctctaagatgcaacaattcttacaaagacaag 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3906 ttttgggtgcgtatgatccagtatacttctctaagatgcaacaattcttacaaaaacaag 3847
Query: 421 aagaagaggtgttaacgaaagctgccaaattagaaactatcggatatcaagaatacttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3846 aagaagaggtgttaacgaaagctgccaaattagaaactatcggatatcaagaatacttga 3787
Query: 481 aaaaataggtcagaaaaccctttatatcgtgtataatcttactactcctgtttcgatctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3786 aaaaataggtcagaaaaccctttatatcgtgtataatcttactactcctgtttcgatctt 3727
Query: 541 ttacatgtcaataacatagcctattcttataactactttaattgttaacgccccattttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3726 ttacatgtcaataacatagcctattcttataactactttaattgttaacgccccattttc 3667
Query: 601 tgaatgacgtggttcatttccctttcaaaatgtgagttcgataattacattgacatattg 660
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3666 tgaatgacgtggttcatttccctttcaaaatgtgagtccgataattacattgacatattg 3607
Query: 661 cgtcaattgatcaactttctgatgtaccaagtcgcgatcacttaggcttgcagatacgac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3606 cgtcaattgatcaactttctgatgtaccaagtcgcgatcacttaggcttgcagatacgac 3547
Query: 721 cttagtgaactccgagagaaggatgaatttttgcttcaggaatgtaggttcagccacgag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3546 cttagtgaactccgagagaaggatgaatttttgcttcaggaatgtaggttcagccacgag 3487
Query: 781 cacaagctttgctagtagttcttcatcagataagtttgaattgccgaaataaagagaacc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3486 cacaagctttgctagtagttcttcatcagataagtttgaattgccgaaataaagagaacc 3427
Query: 841 tctagcatatgatattaaactctttgcattaaattgagactcgtcaagcggaattgattt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3426 tctagcatatgatattaaactctttgcattaaattgagactcgtcaagcggaattgattt 3367
Query: 901 gttggcatatatcaacgcacatttcccatcaaaagtaacaaacttta 947
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3366 gttggcatatatcaacgcacatttcccatcaaaagtaacaaacttta 3320
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6405
Number of Sequences: 1807
Number of extensions: 6405
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 947
length of database: 10,358,551
effective HSP length: 16
effective length of query: 931
effective length of database: 10,329,639
effective search space: 9616893909
effective search space used: 9616893909
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)